{ "id": 18, "date": "2021-12-07T15:15:01", "date_gmt": "2021-12-07T07:15:01", "guid": { "rendered": "https:\/\/chichen6.tcu.edu.tw\/?page_id=18" }, "modified": "2022-10-20T15:23:39", "modified_gmt": "2022-10-20T07:23:39", "slug": "%e8%91%97%e4%bd%9c-publications", "status": "publish", "type": "page", "link": "https:\/\/chichen6.tcu.edu.tw\/en\/?page_id=18", "title": { "rendered": "Publications" }, "content": { "rendered": "

A. Journal paper<\/p>\n\n\n\n

  1. S-J Chen, J-L Cheng, S-A Lee, T-Y Wang, J-Y Jang and K-C Chen* (2021) \u201cElucidate multidimensionality of type 1 diabetes mellitus heterogeneity by multifaceted information,\u201d Scientific Reports 11: 20965, doi: 10.1038\/s41598-021-00388-2 (SCI, IF 4.380; Multidisciplinary Sciences, Rank = 17\/72, 20%<Rank<25%).<\/li>
  2. J-L Cheng*, K-C Chen, H-W Zhang, W-Y Chen and D-Y Wu (2020) \u201cEmulating trusted platform module 2.0 on raspberry Pi 2,\u201d International Journal of Security, Privacy, and Trust Management 9: 1-11.<\/li>
  3. S-J Chen, D-L Liao, C-H Chen, T-Y Wang, and K-C Chen* (2019) \u201cConstruction and analysis of protein-protein interaction network of heroin use disorder,\u201d Scientific Reports 9: 4980, doi: 10.1038\/s41598-019-41552-z (SCI, IF 4.011; Multidisciplinary Sciences, Rank = 15\/69, 20%<Rank<25%).<\/li>
  4. S-J Chen, C-H Chang, K-C Chen, and C-Y Liu* (2016) \u201cAssociation between depressive disorders and risk of breast cancer recurrence after curative surgery,\u201d Medicine 95(33): e4547, doi: 10.1097\/MD.0000000000004547 (SCI, IF 2.133; Medicine, General & Internal Rank = 40\/155, 25%<Rank<30%).<\/li>
  5. S-J Chen, D-L Liao, T-W Shen, H-C Yang, K-C Chen, and C-H Chen* (2016) \u201cGenetic signatures of heroin addiction,\u201d Medicine 95(31): e4473, doi:10.1097\/MD.0000000000004473 (SCI, IF 2.133; Medicine, General & Internal Rank = 40\/155, 25%<Rank<30%).<\/li>
  6. H-T Chu, H Lin, T T-H Tsao, C-F Chang, W WL Hsiao, T-J Yeh, C-M Chang, Y-W Liu, T-Y Wang, K-C Yang, T-J Chen, J-C Chen, K-C Chen, and C-Y Kao* (2013) \u201cGenotyping of human neutrophil antigens (HNA) from whole genome sequencing data,\u201d BMC Medical Genomics 6, 31, doi:10.1186\/1755-8794-6-31 (SCI, IF 3.466; Genetics & Heredity Rank = 57\/161, 35%<Rank<40%).<\/li>
  7. K-C Chen, T-Y Wang, and C-H Chan* (2012) \u201cAssociations between HIV and human pathways revealed by protein-protein interactions and correlated gene expression profiles,\u201d PLoS ONE 7(3), e34240, doi:10.1371\/ journal.pone.0034240 (SCI, IF 4.092; Multidisciplinary Sciences Rank = 7\/56, 10%<Rank<15%).<\/li>
  8. C-H Hsu\u2020, T-Y Wang\u2020, H-T Chu, C-Y Kao, and K-C Chen* (2011) \u201cA quantitative analysis of monochromaticity in genetic interaction networks,\u201d BMC Bioinformatics 12 (Suppl 13), S16, doi:10.1186\/1471-2105-12-S13-S16 (SCI, IF 3.029; Mathematical & Computational Biology Rank = 4\/37, 5%<Rank<10%; Biological Research Methods 26\/71, 35%-40%; Biotechnology & Applied Microbiology 46\/160, 25%<Rank<30%).<\/li>
  9. L-J Su, C-W Chang, Y-C Wu, K-C Chen, C-J Lin, S-C Liang, C-H Lin, J Wang-Peng, S-L Hsu, C-H Chen, and C-Y F. Huang* (2007) \u201cSelection of DDX5 as a novel internal control for Q-RT-PCR from microarray data using a block bootstrap re-sampling scheme,\u201d BMC Genomics 8, 140, (SCI, IF 4.029; Biotechnology & Applied Microbiology Rank = 20\/140, 10%<Rank<15%; Genetics & Heredity Rank = 37\/131, 25%<Rank<30%).<\/li>
  10. Y-C G. Lee, Y-C Hwang, K-C Chen, Y-S Lin, D-Y Huang, T-W Huang, C-Y Kao, H-C Wu, C-T Lin, and C-Y F. Huang* (2007) \u201cEffect of Epstein-Barr virus infection on global gene expression in nasopharyngeal carcinoma,\u201d Functional & Integrative Genomics, 7(1), 79-93, (SCI, IF 4.180; Genetics & Heredity Rank = 33\/132, Rank=25%).<\/li>
  11. K-C Chen, T-Y Wang, H-H Cheng, C-Y F. Huang, and C-Y Kao* (2005) \u201cA stochastic differential equation model for quantifying transcriptional regulatory network in Saccharomyces cerevisiae,\u201d Bioinformatics 21(12), 2883-2890, doi:10.1093\/bioinformatics\/bti415 (SCI, IF 5.742; Biotechnology & Applied Microbiology Rank = 7\/133, 5%<Rank<10%; Biochemical Research Methods Rank = 4\/51, 5%<Rank<10%).<\/li>
  12. C-Y Kao, D.J. Hsu, H-Y Chuang, C-Y F. Huang, and K-C Chen* (2004) \u201cTo combine or not to combine,\u201d International Chinese Statistical Association, Bulletin, July 2004, 37-39.<\/li><\/ol>\n\n\n\n

    B. Conference paper<\/p>\n\n\n\n

    1. T-Y Wang, Y-H Chen, and K-C Chen* (2014) \u201cIdentifying SNP-SNP interactions with CNAs in lymphoma susceptibility,\u201d CSBio 2014, November, Singapore.<\/li>
    2. T-Y Wang, Y-H Chen, and K-C Chen* (2013) \u201cInformation fusion of CNVs and SNPs on gene-gene interactions for molecular subtypes of lymphoma,\u201d ICCI*CC 2013, July, New York, USA. DOI: 10.1109\/ICCI-CC.2013.6622249.<\/li>
    3. T-Y Wang, S-Y Wang, Y-R Lin, and K-C Chen* (2012) \u201cInformation fusion on human disease network in Taiwan,\u201d DIMACS WAIF 2012, November, New York, USA.<\/li>
    4. T-Y Wang, K-C Chen, D.F Hsu, and C-Y Kao* (2009) \u201cCombining agent-based models with stochastic differential equations for gene regulatory networks,\u201d BIBE 2009, June, Taichung, Taiwan.<\/li>
    5. K-C Chen (2004) \u201cEffects of nuisance parameters on the family-based linkage tests under general disease models,\u201d I-SPAN 2004, May, Hong Kong.<\/li>
    6. K-C Chen and J.J. Tai* (2003) \u201cGeneralized linkage disequilibrium tests for case-parent triad families,\u201d \u7b2c\u5341\u4e8c\u5c46\u5357\u5340\u7d71\u8a08\u7814\u8a0e\u6703\u66a8\u4e5d\u5341\u4e8c\u5e74\u5ea6\u4e2d\u83ef\u6a5f\u7387\u7d71\u8a08\u5b78\u6703\u5e74\u6703\u53ca\u5b78\u8853\u7814\u8a0e\u6703.<\/li><\/ol>\n\n\n\n

      C. Conference poster<\/p>\n\n\n\n

      1. T-Y Wang, and K-C Chen* (2018) \u201cQuantification of cancer comorbidity network across gender and age using nation-wide claims data,\u201d LSBE 2018, September, Osaka, Japan.<\/li>
      2. W-T Wang, T-Y Wang, and K-C Chen* (2016) \u201cA rank-based combination method of sequence similarity and composition for binning in metagenomics,\u201d InCoB 2016, September, Singapore.<\/li>
      3. C-H Chiang, T-Y Wang, and K-C Chen* (2016) \u201cQuantification of comorbidity associations between prevalent diseases across gender and age using nation-wide claims data,\u201d InCoB 2016, September, Singapore.<\/li>
      4. T-Y Wang, Z-A Li, and K-C Chen* (2015) \u201cIntegration of gene signatures and population-wide data for elucidating disease-disease associations in thyroid disease,\u201d InCoB 2015, September, Tokyo, Japan.<\/li>
      5. T-Y Wang, Y-H Chen, and K-C Chen* (2012) \u201cThe study of gene-gene interaction for molecular subtypes of lymphoma,\u201d InCoB 2012, October, Mangkok, Thailand.<\/li>
      6. Y-H Hsiao, T-Y Wang, and K-C Chen* (2011) \u201cThe study of disease comorbidity networks using Taiwan medicare data,\u201d InCoB 2011, November, Kuala Lumpur, Malaysia.<\/li>
      7. Y-K Jhong, T-Y Wang, and K-C Chen* (2009) \u201cCombining cluster analysis of dynamics of gene expression profiles,\u201d InCoB 2009, September, Singapore.<\/li>
      8. T-Y Wang, K-C Chen, D.F. Hsu, and C-Y Kao* (2008) \u201cAgent-based models for biochemical systems,\u201d ICMSB 2008, February, Philippine.<\/li><\/ol>\n\n\n\n

        D. Others<\/p>\n\n\n\n

        1. K-C Chen (2003) Generalized linkage disequilibrium tests for case-parent triad families. (Ph.D. dissertation)<\/li><\/ol>\n\n\n\n

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          A. Journal paper S-J Chen, J-L Cheng, S-A Lee, T-Y Wang … Continue reading Publications<\/span> →<\/span><\/a><\/p>", "protected": false }, "author": 2, "featured_media": 0, "parent": 0, "menu_order": 0, "comment_status": "closed", "ping_status": "closed", "template": "", "meta": { "footnotes": "" }, "class_list": [ "post-18", "page", "type-page", "status-publish", "hentry" ], "_links": { "self": [ { "href": "https:\/\/chichen6.tcu.edu.tw\/en\/index.php?rest_route=\/wp\/v2\/pages\/18", "targetHints": { "allow": [ "GET" ] } } ], "collection": [ { "href": "https:\/\/chichen6.tcu.edu.tw\/en\/index.php?rest_route=\/wp\/v2\/pages" } ], "about": [ { "href": "https:\/\/chichen6.tcu.edu.tw\/en\/index.php?rest_route=\/wp\/v2\/types\/page" } ], "author": [ { "embeddable": true, "href": "https:\/\/chichen6.tcu.edu.tw\/en\/index.php?rest_route=\/wp\/v2\/users\/2" } ], "replies": [ { "embeddable": true, "href": "https:\/\/chichen6.tcu.edu.tw\/en\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=18" } ], "version-history": [ { "count": 3, "href": "https:\/\/chichen6.tcu.edu.tw\/en\/index.php?rest_route=\/wp\/v2\/pages\/18\/revisions" } ], "predecessor-version": [ { "id": 264, "href": "https:\/\/chichen6.tcu.edu.tw\/en\/index.php?rest_route=\/wp\/v2\/pages\/18\/revisions\/264" } ], "wp:attachment": [ { "href": "https:\/\/chichen6.tcu.edu.tw\/en\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=18" } ], "curies": [ { "name": "wp", "href": "https:\/\/api.w.org\/{rel}", "templated": true } ] } }